Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | OSCCYDRAFT_RS05835 | Q10XY9 | Positive | 1355997 - 1357487 | 55140.8 |
| hypothetical protein | OSCCYDRAFT_RS05840 | Not Available | Positive | 1358263 - 1358472 | 7835.43 |
| pas domain-containing protein | OSCCYDRAFT_RS26580 | Not Available | Negative | 1358529 - 1358855 | 12057.4 |
| j domain-containing protein | OSCCYDRAFT_RS26030 | Q92BN9 | Positive | 1359078 - 1359878 | 28679.0 |
| duf3143 domain-containing protein | OSCCYDRAFT_RS05850 | Not Available | Positive | 1359956 - 1360228 | 10623.4 |
| isoprenyl transferase | OSCCYDRAFT_RS05855 | Q9ZEJ7 | Negative | 1360225 - 1360974 | 29054.9 |
| diadenylate cyclase cdaa | OSCCYDRAFT_RS05860 | Q45589 | Negative | 1361056 - 1362012 | 35286.7 |
| diaminopimelate decarboxylase | OSCCYDRAFT_RS05865 | Q55484 | Negative | 1362101 - 1363501 | 50756.4 |
| ribosomal protein s18-alanine n-acetyltransferase | OSCCYDRAFT_RS05870 | Not Available | Positive | 1363598 - 1364335 | 27391.7 |
| atp-dependent clp protease atp-binding subunit | OSCCYDRAFT_RS05875 | O78410 | Positive | 1364492 - 1366960 | 91431.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.