Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase domain-containing abc transporter | OSCCYDRAFT_RS05785 | Q03727 | Positive | 1345742 - 1347901 | 78984.3 |
| type iv pilin-like g/h family protein | OSCCYDRAFT_RS05790 | Not Available | Positive | 1348124 - 1348606 | 17274.7 |
| transposase | OSCCYDRAFT_RS05795 | Not Available | Negative | 1348737 - 1350077 | 51348.1 |
| methylenetetrahydrofolate reductase | OSCCYDRAFT_RS05800 | Not Available | Negative | 1350164 - 1351120 | 34260.8 |
| tryptophan--trna ligase | OSCCYDRAFT_RS05805 | Q8YXE4 | Negative | 1351441 - 1352460 | 37725.0 |
| hypothetical protein | OSCCYDRAFT_RS05810 | Not Available | Positive | 1352565 - 1352864 | 11707.8 |
| tetratricopeptide repeat protein | OSCCYDRAFT_RS05815 | Not Available | Negative | 1352871 - 1353560 | 24551.2 |
| dna-formamidopyrimidine glycosylase | OSCCYDRAFT_RS05820 | Q8YP80 | Negative | 1353658 - 1354677 | 38111.8 |
| photosystem i reaction center subunit iv | OSCCYDRAFT_RS05825 | P0A424 | Negative | 1354786 - 1355034 | 9103.82 |
| had family phosphatase | OSCCYDRAFT_RS05830 | O33513 | Positive | 1355213 - 1355917 | 26189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.