Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | OSCCYDRAFT_RS27305 | Not Available | Negative | 1316038 - 1316970 | 34590.9 |
| ai-2e family transporter | OSCCYDRAFT_RS05695 | Q55147 | Positive | 1317952 - 1319007 | 38441.1 |
| rlua family pseudouridine synthase | OSCCYDRAFT_RS05700 | Q8ZIK1 | Positive | 1319034 - 1320656 | 60774.9 |
| is200/is605 family transposase | OSCCYDRAFT_RS05705 | Not Available | Positive | 1320703 - 1321146 | 17326.9 |
| 50s ribosomal protein l11 methyltransferase | OSCCYDRAFT_RS05710 | A9WD89 | Positive | 1321192 - 1322175 | 36201.0 |
| abc-f family atp-binding cassette domain-containing protein | OSCCYDRAFT_RS05715 | O06476 | Negative | 1322355 - 1324280 | 72439.2 |
| efflux rnd transporter periplasmic adaptor subunit | OSCCYDRAFT_RS05720 | Not Available | Positive | 1324679 - 1326130 | 51994.7 |
| efflux rnd transporter permease subunit | OSCCYDRAFT_RS05725 | Q8G2M6 | Positive | 1326171 - 1329485 | 120311.0 |
| hypothetical protein | OSCCYDRAFT_RS25385 | Not Available | Negative | 1329712 - 1329906 | 7087.57 |
| tex family protein | OSCCYDRAFT_RS05730 | P71353 | Positive | 1330759 - 1333047 | 85035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.