Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | OSCCYDRAFT_RS05405 | P34185 | Positive | 1252340 - 1255129 | 102182.0 |
| hypothetical protein | OSCCYDRAFT_RS05410 | Not Available | Positive | 1255318 - 1255719 | 14464.0 |
| cadd family putative folate metabolism protein | OSCCYDRAFT_RS05415 | Q9PJC9 | Positive | 1255855 - 1256559 | 26623.4 |
| alanine dehydrogenase | OSCCYDRAFT_RS05420 | Q6LX40 | Negative | 1256655 - 1257743 | 38800.2 |
| hypothetical protein | OSCCYDRAFT_RS05425 | Not Available | Positive | 1257949 - 1258320 | 13178.3 |
| lipopolysaccharide assembly protein lapb | OSCCYDRAFT_RS05430 | Not Available | Negative | 1258444 - 1259358 | 33258.4 |
| elongation factor g | OSCCYDRAFT_RS05435 | Q55421 | Positive | 1259833 - 1261863 | 74531.4 |
| exosortase-dependent surface protein xdp2 | OSCCYDRAFT_RS05440 | Not Available | Negative | 1262031 - 1262816 | 27300.9 |
| type i glyceraldehyde-3-phosphate dehydrogenase | OSCCYDRAFT_RS05445 | P34917 | Negative | 1263322 - 1264341 | 36919.1 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | OSCCYDRAFT_RS05450 | Q3MAP9 | Negative | 1264521 - 1265129 | 23092.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.