Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endoribonuclease cas6 | OSCCYDRAFT_RS04425 | Not Available | Negative | 1038293 - 1039153 | 31987.7 |
| hypothetical protein | OSCCYDRAFT_RS26535 | Not Available | Positive | 1039208 - 1039420 | 7625.56 |
| type i-d crispr-associated protein cas5/csc1 | OSCCYDRAFT_RS04430 | Not Available | Negative | 1039686 - 1040393 | 27356.7 |
| type i-d crispr-associated protein cas7/csc2 | OSCCYDRAFT_RS04435 | Not Available | Negative | 1040400 - 1041437 | 38832.2 |
| is200/is605 family transposase | OSCCYDRAFT_RS04440 | Not Available | Negative | 1041741 - 1042205 | 17158.3 |
| type i-d crispr-associated protein cas10d/csc3 | OSCCYDRAFT_RS04445 | Not Available | Negative | 1042212 - 1045553 | 127129.0 |
| type i-d crispr-associated helicase cas3' | OSCCYDRAFT_RS04450 | Not Available | Negative | 1045766 - 1047895 | 82296.9 |
| hypothetical protein | OSCCYDRAFT_RS04455 | Not Available | Negative | 1047933 - 1048127 | 7634.06 |
| yafy family protein | OSCCYDRAFT_RS04460 | Not Available | Positive | 1048339 - 1049208 | 33624.4 |
| Trna-gly | Not Available | Not Available | Positive | 1049326 - 1049396 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.