Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nitrite reductase | OSCCYDRAFT_RS02405 | Q51879 | Negative | 566764 - 568344 | 58203.3 |
| hypothetical protein | OSCCYDRAFT_RS02410 | Not Available | Positive | 568883 - 569077 | 7168.57 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | OSCCYDRAFT_RS02415 | Q8YR05 | Negative | 569191 - 570639 | 53980.9 |
| pentapeptide repeat-containing protein | OSCCYDRAFT_RS02420 | Not Available | Negative | 570620 - 571126 | 18774.0 |
| duf2721 domain-containing protein | OSCCYDRAFT_RS02425 | Not Available | Positive | 571488 - 571982 | 18263.0 |
| allophycocyanin subunit alpha-b | OSCCYDRAFT_RS02430 | P80556 | Positive | 572165 - 572650 | 17927.5 |
| uma2 family endonuclease | OSCCYDRAFT_RS26480 | Not Available | Positive | 572972 - 573079 | 3918.49 |
| alpha/beta hydrolase-fold protein | OSCCYDRAFT_RS02435 | Not Available | Positive | 573076 - 574251 | 43693.3 |
| duf429 domain-containing protein | OSCCYDRAFT_RS02440 | Not Available | Negative | 574212 - 574982 | 28309.2 |
| glycosyltransferase family 25 protein | OSCCYDRAFT_RS02445 | Not Available | Positive | 575096 - 575824 | 27623.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.