Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | OSCCYDRAFT_RS01280 | Not Available | Positive | 297300 - 298640 | 51348.1 |
| hypothetical protein | OSCCYDRAFT_RS01285 | Not Available | Negative | 298617 - 299060 | 16250.5 |
| protein kinase | OSCCYDRAFT_RS01290 | Not Available | Negative | 299038 - 299448 | 14862.9 |
| is1 family transposase | OSCCYDRAFT_RS24415 | Not Available | Negative | 299588 - 300328 | 28592.4 |
| is1 family transposase | OSCCYDRAFT_RS24420 | Not Available | Positive | 300637 - 301377 | 28592.4 |
| spoiid/lytb domain-containing protein | OSCCYDRAFT_RS01305 | C0QYX7 | Positive | 301585 - 302652 | 38035.6 |
| tyrosine-type recombinase/integrase | OSCCYDRAFT_RS01310 | O26979 | Positive | 303093 - 303971 | 32988.6 |
| efflux rnd transporter permease subunit | OSCCYDRAFT_RS01315 | Not Available | Negative | 303990 - 307238 | 117089.0 |
| efflux rnd transporter periplasmic adaptor subunit | OSCCYDRAFT_RS01320 | Not Available | Negative | 307349 - 308776 | 51412.8 |
| l-histidine n(alpha)-methyltransferase | OSCCYDRAFT_RS01325 | Not Available | Negative | 308953 - 309987 | 39168.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.