Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase domain-containing protein | OSCCYDRAFT_RS01155 | Not Available | Positive | 261151 - 261468 | 11818.5 |
| hepn domain-containing protein | OSCCYDRAFT_RS01160 | Not Available | Positive | 261452 - 261862 | 15335.2 |
| uma2 family endonuclease | OSCCYDRAFT_RS25925 | Not Available | Positive | 261934 - 263666 | 65853.2 |
| uma2 family endonuclease | OSCCYDRAFT_RS27245 | Not Available | Positive | 263646 - 263798 | 5768.89 |
| uma2 family endonuclease | OSCCYDRAFT_RS25930 | Not Available | Positive | 264357 - 264791 | 16376.7 |
| uma2 family endonuclease | OSCCYDRAFT_RS25935 | Not Available | Positive | 264969 - 265244 | 10729.6 |
| transposase | OSCCYDRAFT_RS01170 | Not Available | Negative | 265501 - 266841 | 51348.1 |
| uma2 family endonuclease | OSCCYDRAFT_RS01175 | Not Available | Positive | 266912 - 267754 | 31075.9 |
| uma2 family endonuclease | OSCCYDRAFT_RS01180 | Not Available | Positive | 267844 - 268491 | 24348.4 |
| swt1 family hepn domain-containing protein | OSCCYDRAFT_RS01185 | Not Available | Positive | 268586 - 271927 | 126717.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.