Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate-starvation-inducible psie family protein | OSCCYDRAFT_RS00505 | Not Available | Positive | 104229 - 104801 | 21349.8 |
| diflavin flavoprotein | OSCCYDRAFT_RS00510 | Q8YNW7 | Positive | 104863 - 106653 | 66179.3 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | OSCCYDRAFT_RS00515 | P72324 | Negative | 106688 - 107797 | 39417.0 |
| uma2 family endonuclease | OSCCYDRAFT_RS25920 | Not Available | Negative | 108149 - 108931 | 29217.0 |
| histidine phosphatase family protein | OSCCYDRAFT_RS00530 | Not Available | Negative | 109165 - 109761 | 22269.9 |
| csbd family protein | OSCCYDRAFT_RS00535 | Q8YXS7 | Positive | 109851 - 110033 | 6577.7 |
| aaa family atpase | OSCCYDRAFT_RS00540 | Not Available | Negative | 110251 - 111393 | 42773.3 |
| single-stranded-dna-specific exonuclease recj | OSCCYDRAFT_RS00545 | O32044 | Positive | 111790 - 113802 | 73890.8 |
| alpha/beta fold hydrolase | OSCCYDRAFT_RS00550 | Q5ZJ01 | Positive | 113799 - 114422 | 22838.9 |
| is200/is605 family transposase | OSCCYDRAFT_RS00555 | Not Available | Positive | 114419 - 114862 | 17326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.