Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase, tatd family | OsccyDRAFT_3720 | P73335 | Negative | 4036280 - 4037080 | 30023.0 |
| ssu ribosomal protein s20p | OsccyDRAFT_3721 | Q8YWL3 | Negative | 4037176 - 4037481 | 11254.6 |
| histidinol dehydrogenase | OsccyDRAFT_3722 | Q3M5D3 | Positive | 4037706 - 4039016 | 47258.7 |
| hypothetical protein | OsccyDRAFT_3723 | Not Available | Negative | 4038984 - 4039370 | 14517.7 |
| anti-anti-sigma factor | OsccyDRAFT_3724 | Not Available | Negative | 4039428 - 4039808 | 14079.9 |
| coproporphyrinogen iii oxidase | OsccyDRAFT_3725 | Q8DL15 | Negative | 4040108 - 4041157 | 40409.1 |
| hypothetical protein | OsccyDRAFT_3726 | Not Available | Positive | 4041480 - 4042001 | 19672.0 |
| atpase involved in chromosome partitioning | OsccyDRAFT_3727 | P53383 | Positive | 4042123 - 4043193 | 37712.1 |
| rod shape-determining protein roda | OsccyDRAFT_3728 | P44468 | Positive | 4043283 - 4044539 | 46223.9 |
| protein of unknown function (duf3252) | OsccyDRAFT_3729 | Q9T0A4 | Positive | 4044667 - 4044864 | 7218.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.