Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zeta-carotene desaturase | OsccyDRAFT_3191 | Q31N27 | Negative | 3486017 - 3487486 | 54468.3 |
| protein of unknown function (duf2949) | OsccyDRAFT_3192 | Not Available | Negative | 3487651 - 3487857 | 7937.5 |
| nucleoside-diphosphate-sugar epimerase | OsccyDRAFT_3193 | Not Available | Negative | 3488105 - 3489070 | 36365.1 |
| uroporphyrinogen decarboxylase | OsccyDRAFT_3194 | B1WVY1 | Negative | 3489232 - 3490296 | 39769.0 |
| hypothetical protein | OsccyDRAFT_3195 | Not Available | Negative | 3490438 - 3491568 | 40888.8 |
| glycosyl transferase possibly involved in lipopolysaccharide synthesis | OsccyDRAFT_3196 | Q46628 | Negative | 3491729 - 3492433 | 27381.8 |
| glycosyltransferase | OsccyDRAFT_3197 | Not Available | Negative | 3492533 - 3493735 | 45680.8 |
| putative rna-binding protein, snrnp like protein | OsccyDRAFT_3198 | A4VWG9 | Negative | 3493982 - 3495757 | 67826.3 |
| hypothetical protein | OsccyDRAFT_3199 | B2J593 | Positive | 3495806 - 3496120 | 11305.6 |
| guanylate kinase | OsccyDRAFT_3200 | Q8Z0I7 | Positive | 3496250 - 3496813 | 21149.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.