Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma subunit, ecf family | OsccyDRAFT_1598 | P44790 | Positive | 1748155 - 1748733 | 22317.7 |
| hypothetical protein | OsccyDRAFT_1599 | Not Available | Positive | 1748730 - 1749119 | 14643.3 |
| hypothetical protein | OsccyDRAFT_1600 | Not Available | Positive | 1749160 - 1749633 | 17989.8 |
| hypothetical protein | OsccyDRAFT_1602 | Not Available | Positive | 1750242 - 1751285 | 40224.6 |
| protein of unknown function upf0227 | OsccyDRAFT_1603 | Not Available | Positive | 1751353 - 1751988 | 23844.4 |
| phosphoacceptor domain-containing protein | OsccyDRAFT_1604 | B2J946 | Negative | 1752021 - 1753316 | 48885.4 |
| hypothetical protein | OsccyDRAFT_1605 | Not Available | Negative | 1753524 - 1754690 | 42787.4 |
| 'carbohydrate-selective porin, oprb family',s-layer domain containing protein | OsccyDRAFT_1606 | Not Available | Positive | 1755116 - 1756999 | 66311.5 |
| protein of unknown function (duf1688) | OsccyDRAFT_1607 | A5H0J3 | Negative | 1757008 - 1758297 | 46670.9 |
| gtp cyclohydrolase ii | OsccyDRAFT_1608 | Q9US41 | Negative | 1758301 - 1759575 | 46137.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.