Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Leptolyngbyales
Family
Leptolyngbyaceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Leptolyngbyales |
| Family | Leptolyngbyaceae |
| Genus | /taxonomy?family=Leptolyngbyaceae&kingdom=Bacillati&klass=Cyanophyceae&level=genus&order=Leptolyngbyales&phylum=Cyanobacteriota |
| Species | Leptolyngbyaceae cyanobacterium JSC-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 45 |
| Temperature range | thermophilic |
| Habitat | Chocolate Pots Hot Springs, Yellowstone National Park, WY, USA; iron-depositing hot spring; microbial mat; phototrophic mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Leptolyngbyaceae cyanobacterium JSC-12 OsccyDRAFT_OTA.1_C20, whole
Gene Summary
Adenine Count
1453537 bp
Thymine Count
1449543 bp
Guanine Count
1302611 bp
Cytosine Count
1322800 bp
Genome Length
5528491 bp
Protein-coding Genes
4780 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | OsccyDRAFT_1172 | Q8Z080 | Positive | 1310680 - 1311402 | 26398.0 |
| protein of unknown function (duf2488) | OsccyDRAFT_1173 | P72777 | Positive | 1311541 - 1311867 | 12400.8 |
| hypothetical protein | OsccyDRAFT_1174 | Not Available | Positive | 1311954 - 1312718 | 27176.4 |
| hypothetical protein | OsccyDRAFT_1175 | Not Available | Negative | 1312856 - 1314196 | 51348.1 |
| signal transduction histidine kinase regulating c4-dicarboxylate transport system | OsccyDRAFT_1176 | Not Available | Negative | 1314210 - 1316570 | 87981.0 |
| putative permease | OsccyDRAFT_1178 | Q55147 | Positive | 1317552 - 1318607 | 38441.1 |
| 23s rna-specific pseudouridylate synthase | OsccyDRAFT_1179 | Q8ZIK1 | Positive | 1318634 - 1320256 | 60774.9 |
| transposase | OsccyDRAFT_1180 | Not Available | Positive | 1320303 - 1320746 | 17326.9 |
| ribosomal protein l11 methylase | OsccyDRAFT_1181 | A9WD89 | Positive | 1320792 - 1321775 | 36201.0 |
| atpase component of abc transporters with duplicated atpase domain | OsccyDRAFT_1182 | O06476 | Negative | 1321955 - 1323880 | 72439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.