Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas hortorum |
| Strain | pv. carotae M081 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xanthomonas hortorum pv. carotae str. M081 chromosome, whole
Gene Summary
Adenine Count
907939 bp
Thymine Count
908782 bp
Guanine Count
1605643 bp
Cytosine Count
1601335 bp
Genome Length
5052399 bp
Protein-coding Genes
4218 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lasso peptide biosynthesis b2 protein | XHC_RS17705 | Not Available | Positive | 4243481 - 4244221 | 27385.4 |
| lasso peptide isopeptide bond-forming cyclase | XHC_RS17710 | Not Available | Positive | 4244221 - 4245954 | 63595.8 |
| atxe2 family lasso peptide isopeptidase | XHC_RS17715 | Not Available | Negative | 4246027 - 4248108 | 74711.0 |
| tonb-dependent receptor plug domain-containing protein | XHC_RS17720 | Not Available | Negative | 4248178 - 4250625 | 85296.4 |
| helix-turn-helix domain-containing protein | XHC_RS17725 | Not Available | Positive | 4251065 - 4251325 | 9943.84 |
| fic family protein | XHC_RS17730 | Not Available | Positive | 4251556 - 4252932 | 51306.7 |
| xvipcd domain-containing protein | XHC_RS23470 | Not Available | Negative | 4253062 - 4254033 | 34846.4 |
| xvipcd domain-containing protein | XHC_RS17745 | Not Available | Negative | 4254202 - 4255356 | 41849.9 |
| hypothetical protein | XHC_RS17750 | Not Available | Negative | 4255391 - 4255798 | 14545.3 |
| siderophore-interacting protein | XHC_RS17760 | Not Available | Negative | 4256644 - 4257432 | 29107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.