Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas hortorum |
| Strain | pv. carotae M081 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xanthomonas hortorum pv. carotae str. M081 chromosome, whole
Gene Summary
Adenine Count
907939 bp
Thymine Count
908782 bp
Guanine Count
1605643 bp
Cytosine Count
1601335 bp
Genome Length
5052399 bp
Protein-coding Genes
4218 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamide-nucleotide adenylyltransferase/nudix hydroxylase | XHC_RS17220 | Not Available | Negative | 4115423 - 4116478 | 39470.4 |
| endonuclease/exonuclease/phosphatase family protein | XHC_RS17225 | Not Available | Positive | 4116649 - 4117527 | 32976.0 |
| hypothetical protein | XHC_RS23175 | Not Available | Negative | 4117623 - 4117766 | 5161.37 |
| carboxy terminal-processing peptidase | XHC_RS17230 | Not Available | Negative | 4118055 - 4120214 | 79234.7 |
| lipoyl synthase | XHC_RS17235 | Not Available | Negative | 4120471 - 4121484 | 36908.2 |
| lipoyl(octanoyl) transferase lipb | XHC_RS17240 | Not Available | Negative | 4121500 - 4122198 | 25183.5 |
| ybed family protein | XHC_RS17245 | Not Available | Negative | 4122186 - 4122464 | 10285.0 |
| lipid a deacylase lpxr family protein | XHC_RS17250 | Not Available | Positive | 4122736 - 4123797 | 39131.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | XHC_RS17255 | Not Available | Negative | 4123942 - 4125147 | 43531.1 |
| septal ring lytic transglycosylase rlpa family protein | XHC_RS17260 | Not Available | Negative | 4125434 - 4126834 | 47694.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.