Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN06295912_102140 | Not Available | Positive | 679091 - 679678 | 20549.4 |
| hypothetical protein | SAMN06295912_102141 | Not Available | Positive | 679705 - 680193 | 17453.6 |
| alkylhydroperoxidase family enzyme, contains cxxc motif | SAMN06295912_102142 | Not Available | Positive | 680183 - 680710 | 18513.2 |
| urca family protein | SAMN06295912_102143 | Not Available | Negative | 680758 - 681162 | 14001.9 |
| d-lactate dehydrogenase (cytochrome) | SAMN06295912_102144 | Not Available | Positive | 681362 - 682798 | 50592.1 |
| glycine zipper 2tm domain-containing protein | SAMN06295912_102145 | Not Available | Negative | 682880 - 683311 | 15536.0 |
| hypothetical protein | SAMN06295912_102146 | Not Available | Positive | 683466 - 684422 | 33627.5 |
| lsu ribosomal protein l28p | SAMN06295912_102147 | Not Available | Negative | 684457 - 684741 | 10437.7 |
| hypothetical protein | SAMN06295912_102148 | Not Available | Positive | 684904 - 685170 | 9216.21 |
| uncharacterized membrane protein yqae, homolog of blt101, upf0057 family | SAMN06295912_102149 | Not Available | Positive | 685167 - 685382 | 7691.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.