Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bo3 quinol oxidase subunit 4 | SAMN06295912_102130 | Not Available | Positive | 666043 - 666450 | 15025.4 |
| surfeit locus 1 family protein | SAMN06295912_102131 | Not Available | Positive | 666585 - 667253 | 23949.8 |
| two-component system, sensor histidine kinase regb | SAMN06295912_102132 | Not Available | Positive | 667250 - 668572 | 47427.2 |
| two-component system, response regulator rega | SAMN06295912_102133 | Not Available | Positive | 668569 - 669108 | 20000.8 |
| transcriptional regulator, tetr family | SAMN06295912_102134 | Not Available | Positive | 669253 - 669918 | 24358.4 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN06295912_102135 | Not Available | Positive | 669968 - 670876 | 34201.4 |
| hypothetical protein | SAMN06295912_102136 | Not Available | Positive | 670876 - 671310 | 15311.1 |
| dyp-type peroxidase family | SAMN06295912_102137 | Not Available | Positive | 671551 - 675093 | 128800.0 |
| tetratricopeptide repeat-containing protein | SAMN06295912_102138 | Not Available | Negative | 675071 - 678043 | 107418.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06295912_102139 | Not Available | Positive | 678288 - 679007 | 25756.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.