Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein, c terminal | SAMN06295912_10257 | Not Available | Negative | 591048 - 592586 | 55908.6 |
| urca family protein | SAMN06295912_10258 | Not Available | Positive | 592830 - 593210 | 13480.3 |
| glutathione s-transferase | SAMN06295912_10259 | Not Available | Positive | 593320 - 593979 | 24349.4 |
| outer membrane protein ompa | SAMN06295912_10283 | Not Available | Positive | 610745 - 611872 | 39208.9 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN06295912_10284 | Not Available | Positive | 612059 - 613627 | 57409.5 |
| phytanoyl-coa dioxygenase (phyh) | SAMN06295912_10285 | Not Available | Positive | 613772 - 614524 | 27147.9 |
| mfs transporter, acs family, hexuronate transporter | SAMN06295912_10286 | Not Available | Positive | 614521 - 615771 | 43889.4 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN06295912_10287 | Not Available | Positive | 615753 - 617273 | 55038.8 |
| glycerol kinase | SAMN06295912_10288 | Not Available | Positive | 617266 - 618753 | 53315.2 |
| atp-binding cassette, subfamily f, uup | SAMN06295912_10289 | Not Available | Positive | 618809 - 620581 | 65402.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.