Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lycopene beta-cyclase | SAMN06295912_101376 | Not Available | Positive | 413361 - 414533 | 43340.2 |
| phytoene desaturase | SAMN06295912_101377 | Not Available | Positive | 414530 - 416008 | 53902.5 |
| hypothetical protein | SAMN06295912_101378 | Not Available | Positive | 416005 - 416589 | 20409.9 |
| phytoene synthase | SAMN06295912_101379 | Not Available | Positive | 416586 - 417515 | 33454.9 |
| hypothetical protein | SAMN06295912_101380 | Not Available | Positive | 417552 - 418070 | 18038.7 |
| phage shock protein c (pspc) family protein | SAMN06295912_101381 | Not Available | Negative | 418109 - 418303 | 7088.0 |
| hypothetical protein | SAMN06295912_101382 | Not Available | Negative | 418329 - 418463 | 4581.72 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295912_101383 | Not Available | Positive | 418756 - 419955 | 42819.3 |
| glycine zipper 2tm domain-containing protein | SAMN06295912_101384 | Not Available | Positive | 420101 - 420388 | 9903.96 |
| snoal-like domain-containing protein | SAMN06295912_101385 | Not Available | Negative | 420476 - 420937 | 17691.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.