Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna/rrna methyltransferase | SAMN06295912_101306 | Not Available | Positive | 345325 - 346368 | 37967.1 |
| isochorismate pyruvate lyase | SAMN06295912_101307 | Not Available | Negative | 346450 - 346752 | 11120.3 |
| ssu ribosomal protein s4p | SAMN06295912_101308 | Not Available | Positive | 347046 - 347660 | 23155.1 |
| hypothetical protein | SAMN06295912_101309 | Not Available | Negative | 347777 - 349315 | 56451.7 |
| zn-dependent amino- or carboxypeptidase, m28 family | SAMN06295912_101310 | Not Available | Positive | 349457 - 351100 | 58890.0 |
| agmatine deiminase | SAMN06295912_101311 | Not Available | Positive | 351106 - 352095 | 34945.1 |
| uncharacterized conserved protein | SAMN06295912_101312 | Not Available | Negative | 352721 - 353149 | 15408.5 |
| pep-cterm protein-sorting domain-containing protein | SAMN06295912_101313 | Not Available | Positive | 353311 - 353928 | 21305.1 |
| 16s rrna processing protein rimm | SAMN06295912_101314 | Not Available | Negative | 354112 - 354579 | 16292.6 |
| ssu ribosomal protein s16p | SAMN06295912_101315 | Not Available | Negative | 354637 - 355062 | 15149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.