Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator protein | SAMN06295912_1605 | Not Available | Positive | 4339742 - 4340749 | 36606.4 |
| helix-turn-helix domain-containing protein | SAMN06295912_1606 | Not Available | Positive | 4341176 - 4342117 | 33051.4 |
| plasmid segregation oscillating atpase parf | SAMN06295912_1607 | Not Available | Positive | 4342351 - 4343010 | 22941.5 |
| hypothetical protein | SAMN06295912_1608 | Not Available | Positive | 4343007 - 4343288 | 9776.75 |
| type iv secretion system protein vird4 | SAMN06295912_1609 | Not Available | Negative | 4343383 - 4344027 | 23533.8 |
| 3' exoribonuclease family, domain 1 | SAMN06295912_1611 | Not Available | Negative | 4344273 - 4344416 | 5104.23 |
| small subunit ribosomal protein s15 | SAMN06295912_1612 | Not Available | Negative | 4344614 - 4344883 | 9980.11 |
| trna pseudouridine synthase b | SAMN06295912_1613 | Not Available | Negative | 4344880 - 4345785 | 31898.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN06295912_1614 | Not Available | Negative | 4345825 - 4346370 | 19908.8 |
| hypothetical protein | SAMN06295912_1615 | Not Available | Positive | 4346543 - 4346635 | 3219.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.