Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c, mono- and diheme variants | SAMN06295912_14818 | Not Available | Negative | 4180131 - 4180511 | 13802.6 |
| 3-hydroxybutyrate dehydrogenase | SAMN06295912_1491 | Not Available | Negative | 4181203 - 4181988 | 27040.5 |
| nte family protein | SAMN06295912_1492 | Not Available | Negative | 4182007 - 4183155 | 41710.6 |
| hypothetical protein | SAMN06295912_1493 | Not Available | Positive | 4183257 - 4184147 | 31152.9 |
| hypothetical protein | SAMN06295912_1494 | Not Available | Negative | 4184280 - 4184816 | 19055.8 |
| outer membrane protein | SAMN06295912_1495 | Not Available | Negative | 4184831 - 4186294 | 51720.7 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN06295912_1496 | Not Available | Negative | 4186318 - 4186968 | 22502.0 |
| uncharacterized conserved protein | SAMN06295912_1497 | Not Available | Positive | 4187185 - 4187559 | 13360.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295912_1498 | Not Available | Positive | 4187556 - 4188794 | 45056.1 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN06295912_1499 | Not Available | Positive | 4188814 - 4189839 | 33785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.