Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN06295912_1476 | Not Available | Negative | 4147648 - 4148727 | 37098.5 |
| hypothetical protein | SAMN06295912_1477 | Not Available | Negative | 4148869 - 4149270 | 14074.3 |
| ef hand | SAMN06295912_1478 | Not Available | Positive | 4149511 - 4149909 | 14070.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN06295912_1479 | Not Available | Positive | 4149999 - 4150733 | 27200.2 |
| signal transduction histidine kinase | SAMN06295912_14710 | Not Available | Positive | 4150727 - 4152064 | 49672.5 |
| hypothetical protein | SAMN06295912_14711 | Not Available | Positive | 4152375 - 4152995 | 21438.9 |
| protein of unknown function | SAMN06295912_14712 | Not Available | Positive | 4153005 - 4153670 | 22262.1 |
| hypothetical protein | SAMN06295912_14713 | Not Available | Positive | 4153905 - 4154114 | 7512.87 |
| hypothetical protein | SAMN06295912_14714 | Not Available | Positive | 4154354 - 4154566 | 7588.02 |
| n-6 dna methylase | SAMN06295912_14715 | Not Available | Positive | 4154616 - 4157489 | 106573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.