Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cholesterol transport system auxiliary component | SAMN06295912_14420 | Not Available | Negative | 4095038 - 4095676 | 23048.4 |
| cbs domain-containing protein | SAMN06295912_1451 | Not Available | Negative | 4096183 - 4096611 | 14987.5 |
| hypothetical protein | SAMN06295912_1452 | Not Available | Positive | 4096698 - 4097027 | 11743.4 |
| acyl-coa thioesterase ycia | SAMN06295912_1453 | Not Available | Positive | 4097024 - 4097419 | 14317.3 |
| hypothetical protein | SAMN06295912_1454 | Not Available | Negative | 4097423 - 4098997 | 56454.3 |
| hypothetical protein | SAMN06295912_1455 | Not Available | Negative | 4099012 - 4100400 | 50608.9 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN06295912_1456 | Not Available | Negative | 4100504 - 4101292 | 28341.5 |
| enoyl-coa hydratase | SAMN06295912_1457 | Not Available | Negative | 4101303 - 4102115 | 27998.5 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN06295912_1458 | Not Available | Positive | 4102148 - 4102735 | 20520.5 |
| regulator rcnb of ni and co efflux | SAMN06295912_1459 | Not Available | Positive | 4102841 - 4103692 | 34098.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.