Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | SAMN06295912_14114 | Not Available | Positive | 4020152 - 4021570 | 53916.8 |
| integrase core domain-containing protein | SAMN06295912_14115 | Not Available | Negative | 4021494 - 4021781 | 10628.4 |
| transposase (or an inactivated derivative) | SAMN06295912_14116 | Not Available | Negative | 4021957 - 4023087 | 42795.7 |
| hth-like domain-containing protein | SAMN06295912_14117 | Not Available | Negative | 4023116 - 4023697 | 22220.8 |
| hypothetical protein | SAMN06295912_14119 | Not Available | Negative | 4023697 - 4024020 | 12353.6 |
| hypothetical protein | SAMN06295912_14120 | Not Available | Positive | 4024073 - 4024273 | 6764.23 |
| dna replication protein dnac | SAMN06295912_14121 | Not Available | Positive | 4024270 - 4025115 | 31363.7 |
| transposase | SAMN06295912_14122 | Not Available | Negative | 4025194 - 4026189 | 37917.5 |
| integrase core domain-containing protein | SAMN06295912_14123 | Not Available | Negative | 4026303 - 4026688 | 14328.0 |
| hypothetical protein | SAMN06295912_1421 | Not Available | Negative | 4026814 - 4028037 | 45923.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.