Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN06295912_14016 | Not Available | Negative | 3989985 - 3991634 | 58115.5 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN06295912_14017 | Not Available | Positive | 3991801 - 3995673 | 136986.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295912_14018 | Not Available | Negative | 3995739 - 3997154 | 49952.0 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN06295912_14019 | Not Available | Negative | 3997166 - 4000375 | 114091.0 |
| rnd family efflux transporter, mfp subunit | SAMN06295912_14020 | Not Available | Negative | 4000417 - 4001727 | 45757.6 |
| hypothetical protein | SAMN06295912_14021 | Not Available | Negative | 4001724 - 4002107 | 13916.8 |
| two component transcriptional regulator, luxr family | SAMN06295912_14022 | Not Available | Positive | 4002393 - 4002953 | 19714.8 |
| transposase is116/is110/is902 family protein | SAMN06295912_1411 | Not Available | Negative | 4003409 - 4003756 | 12946.9 |
| site-specific dna recombinase | SAMN06295912_1412 | Not Available | Negative | 4003822 - 4004382 | 21138.4 |
| methyltransferase domain-containing protein | SAMN06295912_1413 | Not Available | Negative | 4004602 - 4005627 | 38091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.