Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN06295912_101196 | Not Available | Negative | 228388 - 228732 | 11433.6 |
| kef-type potassium/proton antiporter, cpa2 family | SAMN06295912_101197 | Not Available | Negative | 228729 - 230504 | 63290.7 |
| nifu homolog involved in fe-s cluster formation | SAMN06295912_101198 | Not Available | Negative | 230501 - 230935 | 14820.8 |
| membrane protein required for colicin v production | SAMN06295912_101199 | Not Available | Negative | 230974 - 231495 | 18270.8 |
| arylsulfatase | SAMN06295912_101200 | Not Available | Positive | 231673 - 233127 | 54342.2 |
| dna repair protein rada/sms | SAMN06295912_101201 | Not Available | Negative | 233168 - 234532 | 47696.8 |
| branched-chain alpha-keto acid dehydrogenase e2 component | SAMN06295912_101202 | Not Available | Negative | 234633 - 235895 | 44984.1 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN06295912_101203 | Not Available | Negative | 235898 - 236929 | 37305.7 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN06295912_101204 | Not Available | Negative | 236926 - 238194 | 46530.9 |
| pep-cterm protein-sorting domain-containing protein | SAMN06295912_101205 | Not Available | Positive | 238629 - 239231 | 20823.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.