Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator, transcriptional regulator for hemolysin | SAMN06295912_1348 | Not Available | Positive | 3817288 - 3817707 | 15089.1 |
| uncharacterized membrane protein yccc | SAMN06295912_1349 | Not Available | Positive | 3817704 - 3819752 | 73263.5 |
| protein of unknown function | SAMN06295912_13410 | Not Available | Positive | 3819749 - 3819964 | 7648.07 |
| rnd family efflux transporter, mfp subunit | SAMN06295912_13411 | Not Available | Positive | 3819961 - 3820839 | 31865.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295912_13412 | Not Available | Positive | 3820836 - 3822248 | 48934.8 |
| hypothetical protein | SAMN06295912_13413 | Not Available | Positive | 3822327 - 3822743 | 14809.6 |
| hypothetical protein | SAMN06295912_13414 | Not Available | Negative | 3822740 - 3823381 | 23152.6 |
| aspartate/methionine/tyrosine aminotransferase | SAMN06295912_13415 | Not Available | Positive | 3823485 - 3824630 | 40986.3 |
| 2,4-dienoyl-coa reductase | SAMN06295912_13416 | Not Available | Positive | 3824750 - 3826876 | 75584.5 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN06295912_13417 | Not Available | Positive | 3826987 - 3828012 | 35537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.