Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two component transcriptional regulator, luxr familySAMN06295912_1308Not AvailablePositive3677664 - 367828422497.6
hypothetical proteinSAMN06295912_1309Not AvailableNegative3678303 - 36785307926.72
oxygen-independent coproporphyrinogen-3 oxidaseSAMN06295912_13010Not AvailableNegative3678520 - 367983347576.3
outer membrane proteinSAMN06295912_13011Not AvailablePositive3679973 - 368062922923.7
cytochrome oxidase maturation protein, cbb3-typeSAMN06295912_13012Not AvailableNegative3680668 - 36808295555.83
cu2+-exporting atpaseSAMN06295912_13013Not AvailableNegative3680826 - 368295873062.8
nitrogen fixation protein fixhSAMN06295912_13014Not AvailableNegative3682955 - 368341916547.0
cytochrome c oxidase accessory protein fixgSAMN06295912_13015Not AvailableNegative3683416 - 368486753750.3
cytochrome c oxidase cbb3-type subunit 3SAMN06295912_13016Not AvailableNegative3684854 - 368579233512.4
cytochrome c oxidase cbb3-type subunit 4SAMN06295912_13017Not AvailableNegative3685785 - 36859465940.04

Displaying genes 3641 – 3650 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.