Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-dicarboxylate symporter | SAMN06295912_101176 | Not Available | Positive | 203557 - 204876 | 46692.4 |
| 23s rrna pseudouridine2605 synthase | SAMN06295912_101177 | Not Available | Positive | 204934 - 205884 | 34743.2 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN06295912_101178 | Not Available | Positive | 205888 - 206433 | 19121.7 |
| predicted arabinose efflux permease, mfs family | SAMN06295912_101179 | Not Available | Negative | 206402 - 207661 | 43877.7 |
| aquaporin z | SAMN06295912_101180 | Not Available | Negative | 207845 - 208552 | 23571.3 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN06295912_101181 | Not Available | Positive | 208716 - 210950 | 83022.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295912_101182 | Not Available | Negative | 210953 - 211717 | 25590.8 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN06295912_101183 | Not Available | Positive | 211860 - 213011 | 42375.4 |
| iron complex outermembrane recepter protein | SAMN06295912_101184 | Not Available | Positive | 213193 - 215427 | 80829.8 |
| hypothetical protein | SAMN06295912_101185 | Not Available | Positive | 215464 - 216657 | 43825.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.