Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN06295912_1258 | Not Available | Positive | 3432222 - 3433082 | 31079.7 |
| putative proteasome-type protease | SAMN06295912_1259 | Not Available | Positive | 3433161 - 3433916 | 27098.9 |
| citrate synthase | SAMN06295912_12510 | Not Available | Negative | 3433974 - 3435260 | 47259.6 |
| glutamyl-trna synthetase | SAMN06295912_12511 | Not Available | Negative | 3435283 - 3436731 | 52624.6 |
| competence protein comec | SAMN06295912_12512 | Not Available | Positive | 3436759 - 3438897 | 74084.6 |
| dihydrodipicolinate reductase | SAMN06295912_12513 | Not Available | Positive | 3438990 - 3439757 | 25588.6 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN06295912_12514 | Not Available | Positive | 3439765 - 3440424 | 24169.1 |
| hypothetical protein | SAMN06295912_12515 | Not Available | Positive | 3440476 - 3440865 | 13777.9 |
| Trna-arg | Not Available | Not Available | Positive | 3440951 - 3441027 | Not Available |
| l-2-hydroxyglutarate oxidase lhgo | SAMN06295912_12517 | Not Available | Negative | 3441091 - 3442206 | 38929.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.