Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine synthase | SAMN06295912_12452 | Not Available | Positive | 3423362 - 3424762 | 49984.9 |
| predicted zn-dependent peptidase | SAMN06295912_12453 | Not Available | Positive | 3424759 - 3425988 | 42795.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN06295912_12454 | Not Available | Positive | 3425985 - 3426854 | 32565.9 |
| hypothetical protein | SAMN06295912_1251 | Not Available | Positive | 3427100 - 3427465 | 13611.8 |
| pep-cterm protein-sorting domain-containing protein | SAMN06295912_1252 | Not Available | Negative | 3427425 - 3428066 | 22980.1 |
| hypothetical protein | SAMN06295912_1253 | Not Available | Negative | 3428159 - 3428326 | 5956.05 |
| two component transcriptional regulator, winged helix family | SAMN06295912_1254 | Not Available | Positive | 3428532 - 3429233 | 25984.6 |
| hypothetical protein | SAMN06295912_1255 | Not Available | Positive | 3429360 - 3429785 | 15879.3 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN06295912_1256 | Not Available | Positive | 3429876 - 3431324 | 52552.9 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN06295912_1257 | Not Available | Positive | 3431324 - 3432259 | 34265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.