Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
luxr family transcriptional regulator, quorum-sensing system regulator ccirSAMN06295912_12117Not AvailablePositive3216526 - 321727227607.1
acyl-homoserine lactone synthaseSAMN06295912_12118Not AvailablePositive3217421 - 321805323438.4
phytanoyl-coa dioxygenase (phyh)SAMN06295912_12119Not AvailablePositive3218046 - 321895133103.7
transcriptional regulator, gntr familySAMN06295912_12120Not AvailablePositive3218948 - 321955322420.2
hypothetical proteinSAMN06295912_12121Not AvailablePositive3219652 - 32197834686.41
transglutaminase-like superfamily proteinSAMN06295912_12122Not AvailablePositive3219845 - 322047723566.5
asparagine synthase (glutamine-hydrolysing)SAMN06295912_12123Not AvailablePositive3220474 - 322219262382.1
dipeptidyl aminopeptidase/acylaminoacyl peptidaseSAMN06295912_12124Not AvailableNegative3222202 - 322432279244.3
tonb-dependent receptor plug domainSAMN06295912_12125Not AvailableNegative3224316 - 3227240103076.0
fecr family proteinSAMN06295912_12126Not AvailableNegative3227306 - 322830435272.9

Displaying genes 3191 – 3200 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.