Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN06295912_101136 | Not Available | Negative | 144048 - 145964 | 69853.2 |
| homogentisate 1,2-dioxygenase | SAMN06295912_101137 | Not Available | Negative | 146036 - 147322 | 47203.8 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN06295912_101138 | Not Available | Negative | 147344 - 148417 | 39908.2 |
| transcriptional regulator, marr family | SAMN06295912_101139 | Not Available | Negative | 148461 - 148910 | 15965.3 |
| chat domain-containing protein | SAMN06295912_101140 | Not Available | Positive | 149101 - 152241 | 111205.0 |
| adenylate/guanylate cyclase | SAMN06295912_101141 | Not Available | Positive | 152249 - 154294 | 74741.0 |
| hypothetical protein | SAMN06295912_101142 | Not Available | Positive | 154281 - 155030 | 25831.5 |
| potra domain-containing protein, shlb-type | SAMN06295912_101143 | Not Available | Positive | 155315 - 156025 | 25191.7 |
| hypothetical protein | SAMN06295912_101144 | Not Available | Positive | 156151 - 157131 | 35797.8 |
| haemagglutination activity domain-containing protein | SAMN06295912_101145 | Not Available | Positive | 157184 - 166738 | 300451.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.