Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase / sugar isomerase | SAMN06295912_12020 | Not Available | Negative | 3156523 - 3157815 | 46971.1 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN06295912_12021 | Not Available | Negative | 3157836 - 3159950 | 74580.7 |
| sugar (pentulose or hexulose) kinase | SAMN06295912_12022 | Not Available | Positive | 3160062 - 3161480 | 50632.6 |
| l-lactate dehydrogenase (cytochrome) | SAMN06295912_12023 | Not Available | Positive | 3161477 - 3162622 | 40425.9 |
| l-rhamnose-h+ transport protein | SAMN06295912_12024 | Not Available | Positive | 3162659 - 3163708 | 37386.9 |
| mfs transporter, fhs family, l-fucose permease | SAMN06295912_12025 | Not Available | Negative | 3163749 - 3165062 | 44752.1 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295912_12026 | Not Available | Negative | 3165253 - 3166689 | 53391.6 |
| nadph:quinone reductase | SAMN06295912_12027 | Not Available | Positive | 3166916 - 3167905 | 34188.8 |
| hypothetical protein | SAMN06295912_12028 | Not Available | Positive | 3167902 - 3168252 | 13070.6 |
| stress responsive a/b barrel domain | SAMN06295912_12029 | Not Available | Positive | 3168245 - 3168904 | 23843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.