Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex transport system permease proteinSAMN06295912_11971Not AvailablePositive3118715 - 311970133304.2
iron complex transport system atp-binding proteinSAMN06295912_11972Not AvailablePositive3119695 - 312047127159.4
vitamin b12 transporterSAMN06295912_11974Not AvailablePositive3120792 - 312276270706.7
hypothetical proteinSAMN06295912_11975Not AvailablePositive3122777 - 312332818559.1
predicted metal-binding proteinSAMN06295912_11976Not AvailablePositive3123331 - 312373814187.0
putative ca2+/h+ antiporter, tmem165/gdt1 familySAMN06295912_11977Not AvailableNegative3123735 - 312430420464.7
hypothetical proteinSAMN06295912_11978Not AvailablePositive3124606 - 312526222515.4
glucose/arabinose dehydrogenase, beta-propeller foldSAMN06295912_11979Not AvailableNegative3125331 - 312764084495.2
cyclopropane-fatty-acyl-phospholipid synthaseSAMN06295912_11980Not AvailableNegative3127760 - 312899547095.5
ribosome maturation factor rimpSAMN06295912_11981Not AvailablePositive3129206 - 312973018812.5

Displaying genes 3111 – 3120 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.