Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnl | SAMN06295912_101116 | Not Available | Negative | 121139 - 122263 | 39749.0 |
| pp_00113 | SAMN06295912_101117 | Not Available | Negative | 122239 - 123237 | Not Available |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN06295912_101118 | Not Available | Positive | 123322 - 124482 | 40582.8 |
| hypothetical protein | SAMN06295912_101119 | Not Available | Positive | 124479 - 125066 | 20046.2 |
| nicotinamide-nucleotide amidase | SAMN06295912_101120 | Not Available | Positive | 125068 - 125592 | 17387.8 |
| coenzyme q-binding protein coq10 | SAMN06295912_101121 | Not Available | Negative | 125532 - 126014 | 17918.1 |
| lipoic acid synthetase | SAMN06295912_101122 | Not Available | Negative | 126001 - 126921 | 33668.5 |
| carbonic anhydrase | SAMN06295912_101123 | Not Available | Positive | 126989 - 127624 | 22939.3 |
| putative acetyltransferase | SAMN06295912_101124 | Not Available | Negative | 127661 - 128170 | 17639.1 |
| atp-binding cassette protein, chvd family | SAMN06295912_101125 | Not Available | Negative | 128173 - 129852 | 62259.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.