Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclaseSAMN06295912_11742Not AvailableNegative2951460 - 295250937754.9
rna polymerase, sigma 54 subunit, rpon/siglSAMN06295912_11743Not AvailableNegative2952563 - 295410154958.1
lipopolysaccharide export system atp-binding proteinSAMN06295912_11744Not AvailableNegative2954147 - 295492628345.4
23s rrna m(2)a-2503 methyltransferaseSAMN06295912_11745Not AvailableNegative2955054 - 295625044122.6
hypothetical proteinSAMN06295912_11746Not AvailableNegative2956306 - 295680617459.2
probable phosphoglycerate mutaseSAMN06295912_11747Not AvailableNegative2956803 - 295731217790.4
outer membrane immunogenic proteinSAMN06295912_11748Not AvailablePositive2957589 - 295816119940.3
outer membrane immunogenic proteinSAMN06295912_11749Not AvailablePositive2958428 - 295895218110.2
dna polymerase iii, beta subunitSAMN06295912_11750Not AvailablePositive2959103 - 296021540028.4
pilz domain-containing proteinSAMN06295912_11751Not AvailableNegative2960279 - 296060211857.1

Displaying genes 2931 – 2940 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.