Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnase hiiSAMN06295912_11610Not AvailableNegative2825719 - 282632421278.7
hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseSAMN06295912_11611Not AvailableNegative2826341 - 282717427737.8
phosphoglucosamine mutaseSAMN06295912_11612Not AvailableNegative2827171 - 282850847106.9
alanine or glycine:cation symporter, agcs familySAMN06295912_11613Not AvailablePositive2828594 - 282999149111.9
transcription elongation factor, grea/greb familySAMN06295912_11614Not AvailableNegative2830022 - 283049216770.8
arylsulfataseSAMN06295912_11615Not AvailableNegative2830506 - 283210757231.9
predicted arabinose efflux permease, mfs familySAMN06295912_11616Not AvailablePositive2832293 - 283349540607.0
amino acid/polyamine/organocation transporter, apc superfamilySAMN06295912_11617Not AvailablePositive2833554 - 283497549532.8
pep-cterm protein-sorting domain-containing proteinSAMN06295912_11618Not AvailableNegative2835027 - 283566822554.3
two component, sigma54 specific, transcriptional regulator, fis familySAMN06295912_11619Not AvailableNegative2835823 - 283723850208.5

Displaying genes 2821 – 2830 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.