Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN06295912_1153 | Not Available | Positive | 2730030 - 2731229 | 44476.6 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN06295912_1154 | Not Available | Negative | 2731263 - 2732786 | 54010.7 |
| murein l,d-transpeptidase ycbb/ykud | SAMN06295912_1155 | Not Available | Negative | 2732876 - 2734372 | 54959.6 |
| hypothetical protein | SAMN06295912_1156 | Not Available | Negative | 2734495 - 2734716 | 7262.58 |
| l,d-transpeptidase catalytic domain | SAMN06295912_1157 | Not Available | Negative | 2734920 - 2735522 | 21055.2 |
| hypothetical protein | SAMN06295912_1158 | Not Available | Negative | 2735745 - 2735942 | 7373.86 |
| uncharacterized conserved protein, duf885 familyt | SAMN06295912_1159 | Not Available | Positive | 2736171 - 2737988 | 66123.4 |
| cytochrome c oxidase subunit 2 | SAMN06295912_11510 | Not Available | Positive | 2738220 - 2739077 | 31671.4 |
| cytochrome c oxidase subunit 1 | SAMN06295912_11511 | Not Available | Positive | 2739077 - 2740822 | 64509.2 |
| cytochrome c oxidase subunit 3 | SAMN06295912_11512 | Not Available | Positive | 2740819 - 2741529 | 24869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.