Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside-diphosphate-sugar epimeraseSAMN06295912_1149Not AvailablePositive2639968 - 264086431935.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295912_11410Not AvailablePositive2640868 - 264166827332.3
crotonobetainyl-coa:carnitine coa-transferase caibSAMN06295912_11411Not AvailablePositive2641721 - 264417186639.1
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN06295912_11412Not AvailablePositive2644291 - 264504627233.0
signal transduction histidine kinaseSAMN06295912_11413Not AvailablePositive2645054 - 264635245622.3
ptsintr with gaf domain, ptspSAMN06295912_11414Not AvailablePositive2646432 - 264869983495.8
protein rodz, contains xre-like hth and duf4115 domainsSAMN06295912_11415Not AvailablePositive2648824 - 264966328921.7
tola-binding proteinSAMN06295912_11416Not AvailablePositive2649758 - 265066332354.5
trna(ile)-lysidine synthaseSAMN06295912_11417Not AvailablePositive2650677 - 265161832994.6
membrane protease ftsh catalytic subunitSAMN06295912_11418Not AvailablePositive2651701 - 265364771016.3

Displaying genes 2651 – 2660 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.