Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | SAMN06295912_11369 | Not Available | Negative | 2602707 - 2603573 | 30830.1 |
| septum formation protein | SAMN06295912_11370 | Not Available | Negative | 2603570 - 2604166 | 21289.8 |
| hypothetical protein | SAMN06295912_11371 | Not Available | Negative | 2604163 - 2604987 | 30470.5 |
| uroporphyrinogen decarboxylase | SAMN06295912_11372 | Not Available | Positive | 2605300 - 2606361 | 38239.9 |
| putative membrane protein | SAMN06295912_11373 | Not Available | Positive | 2606371 - 2606838 | 17293.9 |
| inner membrane protein | SAMN06295912_11374 | Not Available | Positive | 2606855 - 2607379 | 18109.6 |
| transcription termination factor rho | SAMN06295912_11375 | Not Available | Positive | 2607556 - 2608812 | 46529.4 |
| integral membrane protein, yjbe family | SAMN06295912_11376 | Not Available | Positive | 2608940 - 2609611 | 23653.5 |
| hypothetical protein | SAMN06295912_11377 | Not Available | Negative | 2609649 - 2609924 | 9819.79 |
| nadph2:quinone reductase | SAMN06295912_11378 | Not Available | Negative | 2609969 - 2610949 | 33867.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.