Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine transport system permease proteinSAMN06295912_11349Not AvailableNegative2586275 - 258711430720.2
spermidine/putrescine transport system permease proteinSAMN06295912_11350Not AvailableNegative2587111 - 258798632419.6
glutamate--putrescine ligaseSAMN06295912_11351Not AvailableNegative2588004 - 258937749583.7
aldehyde dehydrogenase (acceptor)SAMN06295912_11352Not AvailableNegative2589374 - 259087953062.7
predicted naringenin-chalcone synthaseSAMN06295912_11353Not AvailablePositive2591092 - 259217737345.2
methyltransferase domain-containing proteinSAMN06295912_11354Not AvailablePositive2592191 - 259287725295.5
dehydrogenase (flavoprotein)SAMN06295912_11355Not AvailablePositive2592856 - 259392936245.2
peptide-methionine (r)-s-oxide reductaseSAMN06295912_11356Not AvailablePositive2593962 - 259436014530.9
penicillin-binding protein 1aSAMN06295912_11357Not AvailablePositive2594427 - 259649374886.2
hypothetical proteinSAMN06295912_11358Not AvailableNegative2596469 - 259718526110.7

Displaying genes 2591 – 2600 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.