Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | SAMN06295912_11329 | Not Available | Negative | 2564224 - 2564826 | 22015.2 |
| hypothetical protein | SAMN06295912_11330 | Not Available | Positive | 2564906 - 2565391 | 17613.7 |
| fumarase, class ii | SAMN06295912_11331 | Not Available | Positive | 2565479 - 2566885 | 49157.9 |
| snoal-like domain-containing protein | SAMN06295912_11332 | Not Available | Positive | 2566978 - 2567508 | 20255.9 |
| hypothetical protein | SAMN06295912_11333 | Not Available | Positive | 2567537 - 2567740 | 6921.57 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06295912_11334 | Not Available | Negative | 2567799 - 2569142 | 47737.7 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06295912_11335 | Not Available | Negative | 2569132 - 2570535 | 50843.3 |
| hlyd family secretion protein | SAMN06295912_11336 | Not Available | Positive | 2570783 - 2572111 | 47723.8 |
| putative abc transport system atp-binding protein | SAMN06295912_11337 | Not Available | Positive | 2572117 - 2572797 | 24906.0 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN06295912_11338 | Not Available | Positive | 2572794 - 2573279 | 17406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.