Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline 4-hydroxylase (includes rps23 pro-64 3,4-dihydroxylase tpa1), contains sm-20 domainSAMN06295912_11319Not AvailablePositive2556160 - 255700832024.1
hypothetical proteinSAMN06295912_11320Not AvailableNegative2557100 - 25573759870.84
histidinol-phosphate aminotransferaseSAMN06295912_11321Not AvailablePositive2557587 - 255868739220.5
cyclohexadieny/prephenate dehydrogenaseSAMN06295912_11322Not AvailablePositive2558687 - 255959532010.1
amino acid/polyamine/organocation transporter, apc superfamilySAMN06295912_11323Not AvailableNegative2559709 - 256127154611.7
diadenosine tetraphosphate (ap4a) hydrolaseSAMN06295912_11324Not AvailableNegative2561374 - 256175414037.8
phosphoribosyl-atp pyrophosphataseSAMN06295912_11325Not AvailableNegative2561764 - 256208411528.9
cyclaseSAMN06295912_11326Not AvailableNegative2562119 - 256288026030.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseSAMN06295912_11327Not AvailableNegative2562877 - 256361125356.2
imidazole glycerol phosphate synthase subunit hishSAMN06295912_11328Not AvailableNegative2563611 - 256423421403.7

Displaying genes 2561 – 2570 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.