Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, mucr familySAMN06295912_11293Not AvailablePositive2513231 - 251373117976.8
antitoxin vapbSAMN06295912_11294Not AvailableNegative2513831 - 25140799133.01
ribonuclease vapcSAMN06295912_11295Not AvailableNegative2514169 - 251457014008.7
prevent-host-death family proteinSAMN06295912_11296Not AvailableNegative2514567 - 25148249249.02
c-terminal domain on strawberry notch homologueSAMN06295912_11297Not AvailableNegative2514945 - 2519240155468.0
chromosome partitioning protein, parb familySAMN06295912_11298Not AvailableNegative2519363 - 252139673991.8
toprim domain-containing proteinSAMN06295912_11299Not AvailableNegative2521431 - 252234833055.5
regulatory helix-turn-helix protein, lysr familySAMN06295912_112100Not AvailableNegative2522444 - 252325929184.0
fecr family proteinSAMN06295912_112101Not AvailableNegative2523453 - 252444234840.9
rna polymerase sigma-70 factor, ecf subfamilySAMN06295912_112102Not AvailableNegative2524496 - 252503820338.2

Displaying genes 2521 – 2530 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.