Edaphosphingomonas laterariae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Edaphosphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusEdaphosphingomonas
SpeciesEdaphosphingomonas laterariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas laterariae strain LNB2 genome assembly, contig:

Gene Summary

Adenine Count

761980 bp

Thymine Count

764347 bp

Guanine Count

1446694 bp

Cytosine Count

1446367 bp

Genome Length

4419388 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295912_11199Not AvailableNegative2411274 - 241202025374.5
imidazolonepropionaseSAMN06295912_111100Not AvailableNegative2412042 - 241407272532.1
iron complex outermembrane recepter proteinSAMN06295912_111101Not AvailablePositive2414213 - 241639678602.2
uncharacterized iron-regulated membrane proteinSAMN06295912_111102Not AvailablePositive2416465 - 241752638613.3
l,d-transpeptidase catalytic domainSAMN06295912_111103Not AvailableNegative2417531 - 241815122172.7
amidase/6-aminohexanoate-cyclic-dimer hydrolaseSAMN06295912_111104Not AvailableNegative2418268 - 241977352439.8
l,d-transpeptidase catalytic domainSAMN06295912_111105Not AvailablePositive2420022 - 242100834545.9
transcriptional regulator, arac familySAMN06295912_111106Not AvailableNegative2421035 - 242205437161.9
predicted metal-dependent hydrolase, tim-barrel foldSAMN06295912_111107Not AvailableNegative2422218 - 242333342269.8
hypothetical proteinSAMN06295912_111108Not AvailableNegative2423469 - 242426927720.2

Displaying genes 2411 – 2420 of 4350 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.