Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295912_110108 | Not Available | Negative | 2262857 - 2263453 | 22234.5 |
| hypothetical protein | SAMN06295912_110109 | Not Available | Positive | 2263734 - 2264009 | 8641.6 |
| heavy-metal resistance | SAMN06295912_110110 | Not Available | Positive | 2264006 - 2264449 | 16325.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295912_110111 | Not Available | Positive | 2264446 - 2265009 | 20814.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN06295912_110112 | Not Available | Negative | 2265044 - 2268115 | 109697.0 |
| hlyd family secretion protein | SAMN06295912_110113 | Not Available | Negative | 2268112 - 2269200 | 38179.4 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295912_110114 | Not Available | Negative | 2269209 - 2270663 | 51180.6 |
| transcriptional regulator, tetr family | SAMN06295912_110115 | Not Available | Positive | 2270790 - 2271434 | 23458.1 |
| tonb dependent receptor | SAMN06295912_110116 | Not Available | Positive | 2271611 - 2272051 | 16207.0 |
| hypothetical protein | SAMN06295912_110117 | Not Available | Positive | 2272129 - 2272458 | 11262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.