Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhd protein | SAMN06295912_11098 | Not Available | Positive | 2254253 - 2255059 | 28162.0 |
| porphobilinogen synthase | SAMN06295912_11099 | Not Available | Positive | 2255070 - 2256065 | 35461.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN06295912_110100 | Not Available | Positive | 2256097 - 2256651 | 20495.7 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN06295912_110101 | Not Available | Positive | 2256639 - 2257172 | 18287.2 |
| hypothetical protein | SAMN06295912_110102 | Not Available | Negative | 2257188 - 2257700 | 17367.5 |
| Trna-arg | Not Available | Not Available | Positive | 2257782 - 2257858 | Not Available |
| protein-tyrosine phosphatase | SAMN06295912_110104 | Not Available | Negative | 2258123 - 2258767 | 23622.2 |
| hypothetical protein | SAMN06295912_110105 | Not Available | Negative | 2258761 - 2259174 | 14453.5 |
| iron complex outermembrane recepter protein | SAMN06295912_110106 | Not Available | Negative | 2259259 - 2261796 | 91916.1 |
| fecr family protein | SAMN06295912_110107 | Not Available | Negative | 2261852 - 2262856 | 36522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.