Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Edaphosphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Edaphosphingomonas |
| Species | Edaphosphingomonas laterariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
761980 bp
Thymine Count
764347 bp
Guanine Count
1446694 bp
Cytosine Count
1446367 bp
Genome Length
4419388 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 2,3-dioxygenase | SAMN06295912_11068 | Not Available | Positive | 2227695 - 2228222 | 18922.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295912_11069 | Not Available | Positive | 2228233 - 2229054 | 28425.1 |
| hypothetical protein | SAMN06295912_11070 | Not Available | Positive | 2229096 - 2229521 | 15915.9 |
| hypothetical protein | SAMN06295912_11071 | Not Available | Negative | 2229568 - 2230272 | 23941.7 |
| hypothetical protein | SAMN06295912_11072 | Not Available | Negative | 2230269 - 2231066 | 28608.2 |
| cache domain-containing protein | SAMN06295912_11073 | Not Available | Negative | 2231486 - 2232538 | 37947.9 |
| hypothetical protein | SAMN06295912_11074 | Not Available | Positive | 2232689 - 2233252 | 19812.0 |
| gmp synthase (glutamine-hydrolyzing) | SAMN06295912_11075 | Not Available | Positive | 2233377 - 2234939 | 56608.8 |
| holliday junction dna helicase subunit ruva | SAMN06295912_11076 | Not Available | Negative | 2235063 - 2235662 | 19895.0 |
| holliday junction endonuclease ruvc | SAMN06295912_11077 | Not Available | Negative | 2235659 - 2236108 | 15537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.